Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 AL645608.8-201ENST00000606034 2086 ntBASIC14.2□□□□□ -0.14
LINC00479Q96M42 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 AC004911.1-201ENST00000416316 871 ntBASIC14.2□□□□□ -0.14
LINC00479Q96M42 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 AC105036.2-201ENST00000569468 176 ntBASIC14.2□□□□□ -0.14
LINC00479Q96M42 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00479Q96M42 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00479Q96M42 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00479Q96M42 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00479Q96M42 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms