Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC10.21□□□□□ -0.78
SPTSSBQ8NFR3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SPTSSBQ8NFR3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms