Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC083906.6-201ENST00000641366 219 ntBASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 AC093458.2-201ENST00000623150 629 ntBASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 AC116407.4-201ENST00000623319 1061 ntBASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN4BQ8IWT1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN4BQ8IWT1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN4BQ8IWT1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SCN4BQ8IWT1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN4BQ8IWT1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN4BQ8IWT1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN4BQ8IWT1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.58■□□□□ 0.73
SCN4BQ8IWT1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 AL136038.4-201ENST00000603606 1261 ntBASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN4BQ8IWT1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN4BQ8IWT1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 AL391807.1-203ENST00000604392 2365 ntBASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 AL645929.1-201ENST00000420084 975 ntBASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms