Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 KRT16P4-201ENST00000453883 522 ntBASIC19.67■□□□□ 0.74
RNF135Q8IUD6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 AC024243.1-201ENST00000609234 778 ntBASIC19.67■□□□□ 0.74
RNF135Q8IUD6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.66■□□□□ 0.74
RNF135Q8IUD6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 TSPY12P-201ENST00000421279 868 ntBASIC19.66■□□□□ 0.74
RNF135Q8IUD6 TOB2P1-201ENST00000469761 992 ntBASIC19.66■□□□□ 0.74
RNF135Q8IUD6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF135Q8IUD6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF135Q8IUD6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF135Q8IUD6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF135Q8IUD6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 MIR1233-2-201ENST00000408138 82 ntBASIC19.64■□□□□ 0.73
RNF135Q8IUD6 MIR1233-1-201ENST00000408722 82 ntBASIC19.64■□□□□ 0.73
RNF135Q8IUD6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF135Q8IUD6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF135Q8IUD6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms