Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LDB1Q86U70 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LDB1Q86U70 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB1Q86U70 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.55■□□□□ 0.56
LDB1Q86U70 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LDB1Q86U70 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LDB1Q86U70 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.55■□□□□ 0.56
LDB1Q86U70 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB1Q86U70 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LDB1Q86U70 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LDB1Q86U70 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LDB1Q86U70 AC036111.1-201ENST00000533973 1582 ntBASIC18.55■□□□□ 0.56
LDB1Q86U70 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB1Q86U70 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB1Q86U70 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.54■□□□□ 0.56
LDB1Q86U70 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 AC073592.3-201ENST00000625118 1834 ntBASIC18.54■□□□□ 0.56
LDB1Q86U70 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.54■□□□□ 0.56
LDB1Q86U70 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.54■□□□□ 0.56
LDB1Q86U70 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 MIR564-202ENST00000385049 94 ntBASIC18.54■□□□□ 0.56
LDB1Q86U70 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
LDB1Q86U70 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.54■□□□□ 0.56
LDB1Q86U70 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.54■□□□□ 0.56
LDB1Q86U70 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.54■□□□□ 0.56
LDB1Q86U70 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.54■□□□□ 0.56
LDB1Q86U70 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.54■□□□□ 0.56
LDB1Q86U70 AL353719.1-201ENST00000566847 864 ntBASIC18.54■□□□□ 0.56
LDB1Q86U70 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.54■□□□□ 0.56
LDB1Q86U70 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.54■□□□□ 0.56
LDB1Q86U70 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.54■□□□□ 0.56
LDB1Q86U70 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LDB1Q86U70 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.54■□□□□ 0.56
LDB1Q86U70 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LDB1Q86U70 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 AC135050.7-201ENST00000624508 2218 ntBASIC18.54■□□□□ 0.56
LDB1Q86U70 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.54■□□□□ 0.56
LDB1Q86U70 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LDB1Q86U70 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDB1Q86U70 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.54■□□□□ 0.56
LDB1Q86U70 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.53■□□□□ 0.56
LDB1Q86U70 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 KRT8P45-201ENST00000414328 1447 ntBASIC18.53■□□□□ 0.56
LDB1Q86U70 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.53■□□□□ 0.56
LDB1Q86U70 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.53■□□□□ 0.56
LDB1Q86U70 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.53■□□□□ 0.56
LDB1Q86U70 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.53■□□□□ 0.56
LDB1Q86U70 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.53■□□□□ 0.56
LDB1Q86U70 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms