Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
LCA10Q71F78 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 AL645608.8-201ENST00000606034 2086 ntBASIC10.03□□□□□ -0.8
LCA10Q71F78 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 NAA20-201ENST00000310450 920 ntTSL 2 BASIC10.03□□□□□ -0.8
LCA10Q71F78 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 PTPA-214ENST00000423100 988 ntTSL 2 BASIC10.03□□□□□ -0.8
LCA10Q71F78 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 AGK-211ENST00000629555 2765 ntTSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 PCDHB19P-201ENST00000570871 2371 ntBASIC10.03□□□□□ -0.8
LCA10Q71F78 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC10.03□□□□□ -0.8
LCA10Q71F78 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
LCA10Q71F78 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC10.03□□□□□ -0.8
LCA10Q71F78 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
LCA10Q71F78 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
LCA10Q71F78 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC10.03□□□□□ -0.8
LCA10Q71F78 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
LCA10Q71F78 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC10.03□□□□□ -0.8
LCA10Q71F78 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LCA10Q71F78 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC10.02□□□□□ -0.8
LCA10Q71F78 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
LCA10Q71F78 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC10.02□□□□□ -0.8
LCA10Q71F78 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC10.02□□□□□ -0.8
LCA10Q71F78 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LCA10Q71F78 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC10.02□□□□□ -0.8
LCA10Q71F78 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC10.02□□□□□ -0.81
LCA10Q71F78 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC10.02□□□□□ -0.81
LCA10Q71F78 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.02□□□□□ -0.81
LCA10Q71F78 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC10.02□□□□□ -0.81
LCA10Q71F78 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC10.02□□□□□ -0.81
LCA10Q71F78 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC10.02□□□□□ -0.81
LCA10Q71F78 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC10.02□□□□□ -0.81
LCA10Q71F78 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 AL031432.3-201ENST00000607698 485 ntBASIC10.02□□□□□ -0.81
LCA10Q71F78 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC10.02□□□□□ -0.81
LCA10Q71F78 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LCA10Q71F78 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms