Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 RPP21-222ENST00000433076 577 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 AP005435.1-201ENST00000529293 1178 ntBASIC9.35□□□□□ -0.91
LINC01554Q52M75 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 TRIR-205ENST00000592273 783 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 AC136469.2-201ENST00000623944 1028 ntBASIC9.35□□□□□ -0.91
LINC01554Q52M75 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 AC007225.1-201ENST00000566331 1836 ntBASIC9.35□□□□□ -0.91
LINC01554Q52M75 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01554Q52M75 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01554Q52M75 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 AC067930.6-201ENST00000623257 4947 ntBASIC9.34□□□□□ -0.91
LINC01554Q52M75 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 PTMA-205ENST00000410064 814 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 AL138724.1-201ENST00000606771 1088 ntBASIC9.34□□□□□ -0.91
LINC01554Q52M75 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC01554Q52M75 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
LINC01554Q52M75 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms