Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CBX1P83916 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.48■□□□□ 0.71
CBX1P83916 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.48■□□□□ 0.71
CBX1P83916 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CBX1P83916 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CBX1P83916 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CBX1P83916 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CBX1P83916 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CBX1P83916 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.47■□□□□ 0.71
CBX1P83916 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.47■□□□□ 0.71
CBX1P83916 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.47■□□□□ 0.71
CBX1P83916 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CBX1P83916 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.47■□□□□ 0.71
CBX1P83916 REXO1L9P-201ENST00000604264 2108 ntBASIC19.47■□□□□ 0.71
CBX1P83916 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.47■□□□□ 0.71
CBX1P83916 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CBX1P83916 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.47■□□□□ 0.71
CBX1P83916 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.47■□□□□ 0.71
CBX1P83916 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.47■□□□□ 0.71
CBX1P83916 AC106886.4-201ENST00000623557 2502 ntBASIC19.47■□□□□ 0.71
CBX1P83916 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CBX1P83916 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.46■□□□□ 0.71
CBX1P83916 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.46■□□□□ 0.71
CBX1P83916 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.46■□□□□ 0.71
CBX1P83916 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CBX1P83916 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CBX1P83916 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.46■□□□□ 0.71
CBX1P83916 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.46■□□□□ 0.71
CBX1P83916 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 OR6D1P-203ENST00000641209 4860 ntBASIC19.46■□□□□ 0.71
CBX1P83916 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CBX1P83916 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
CBX1P83916 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX1P83916 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX1P83916 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX1P83916 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX1P83916 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 AGGF1P2-201ENST00000426656 2106 ntBASIC19.45■□□□□ 0.7
CBX1P83916 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX1P83916 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 PTBP1P-201ENST00000554374 1601 ntBASIC19.45■□□□□ 0.7
CBX1P83916 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX1P83916 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.45■□□□□ 0.7
CBX1P83916 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.45■□□□□ 0.7
CBX1P83916 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CBX1P83916 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CBX1P83916 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.45■□□□□ 0.7
CBX1P83916 ZNF815P-204ENST00000434898 1737 ntBASIC19.45■□□□□ 0.7
CBX1P83916 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.44■□□□□ 0.7
CBX1P83916 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CBX1P83916 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.44■□□□□ 0.7
CBX1P83916 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.44■□□□□ 0.7
CBX1P83916 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.44■□□□□ 0.7
CBX1P83916 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.44■□□□□ 0.7
CBX1P83916 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.44■□□□□ 0.7
CBX1P83916 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.44■□□□□ 0.7
CBX1P83916 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms