Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SMIM11AP58511 AL357033.4-201ENST00000617703 1807 ntBASIC17.16■□□□□ 0.34
SMIM11AP58511 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11AP58511 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.16■□□□□ 0.34
SMIM11AP58511 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11AP58511 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.16■□□□□ 0.34
SMIM11AP58511 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11AP58511 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11AP58511 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11AP58511 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11AP58511 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM11AP58511 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM11AP58511 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM11AP58511 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM11AP58511 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMIM11AP58511 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.15■□□□□ 0.34
SMIM11AP58511 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMIM11AP58511 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM11AP58511 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SMIM11AP58511 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.15■□□□□ 0.34
SMIM11AP58511 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11AP58511 AC020916.1-201ENST00000587762 1774 ntBASIC17.15■□□□□ 0.34
SMIM11AP58511 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM11AP58511 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SMIM11AP58511 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SMIM11AP58511 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SMIM11AP58511 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SMIM11AP58511 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.14■□□□□ 0.33
SMIM11AP58511 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.14■□□□□ 0.33
SMIM11AP58511 AP003097.1-201ENST00000530657 1135 ntBASIC17.14■□□□□ 0.33
SMIM11AP58511 AC008403.3-201ENST00000598924 454 ntBASIC17.14■□□□□ 0.33
SMIM11AP58511 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
SMIM11AP58511 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.14■□□□□ 0.33
SMIM11AP58511 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11AP58511 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.14■□□□□ 0.33
SMIM11AP58511 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM11AP58511 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM11AP58511 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM11AP58511 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM11AP58511 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.13■□□□□ 0.33
SMIM11AP58511 AC069544.1-201ENST00000609399 999 ntBASIC17.13■□□□□ 0.33
SMIM11AP58511 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 AC135776.1-201ENST00000319817 2481 ntBASIC17.13■□□□□ 0.33
SMIM11AP58511 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM11AP58511 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM11AP58511 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11AP58511 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SMIM11AP58511 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM11AP58511 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM11AP58511 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM11AP58511 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms