Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.23■□□□□ 0.19
GSK3AP49840 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.23■□□□□ 0.19
GSK3AP49840 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.23■□□□□ 0.19
GSK3AP49840 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
GSK3AP49840 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
GSK3AP49840 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.23■□□□□ 0.19
GSK3AP49840 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
GSK3AP49840 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GSK3AP49840 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 AC116562.2-201ENST00000507042 360 ntBASIC16.22■□□□□ 0.19
GSK3AP49840 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
GSK3AP49840 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.22■□□□□ 0.19
GSK3AP49840 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.22■□□□□ 0.19
GSK3AP49840 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.22■□□□□ 0.19
GSK3AP49840 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 AC113410.3-201ENST00000623366 203 ntBASIC16.22■□□□□ 0.19
GSK3AP49840 AL049637.2-201ENST00000641778 930 ntBASIC16.22■□□□□ 0.19
GSK3AP49840 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
GSK3AP49840 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.22■□□□□ 0.19
GSK3AP49840 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GSK3AP49840 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
GSK3AP49840 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.21■□□□□ 0.19
GSK3AP49840 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.21■□□□□ 0.19
GSK3AP49840 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GSK3AP49840 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.21■□□□□ 0.19
GSK3AP49840 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.21■□□□□ 0.19
GSK3AP49840 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.21■□□□□ 0.19
GSK3AP49840 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.21■□□□□ 0.19
GSK3AP49840 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.21■□□□□ 0.19
GSK3AP49840 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.21■□□□□ 0.19
GSK3AP49840 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
GSK3AP49840 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GSK3AP49840 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.21■□□□□ 0.19
GSK3AP49840 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.21■□□□□ 0.19
GSK3AP49840 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.21■□□□□ 0.19
GSK3AP49840 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
GSK3AP49840 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.21■□□□□ 0.18
GSK3AP49840 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.21■□□□□ 0.18
GSK3AP49840 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GSK3AP49840 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
GSK3AP49840 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GSK3AP49840 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GSK3AP49840 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.2■□□□□ 0.18
GSK3AP49840 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GSK3AP49840 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GSK3AP49840 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GSK3AP49840 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GSK3AP49840 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GSK3AP49840 MTMR9LP-203ENST00000426597 1545 ntBASIC16.2■□□□□ 0.18
GSK3AP49840 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GSK3AP49840 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GSK3AP49840 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.2■□□□□ 0.18
GSK3AP49840 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GSK3AP49840 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.2■□□□□ 0.18
GSK3AP49840 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.2■□□□□ 0.18
GSK3AP49840 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.2■□□□□ 0.18
GSK3AP49840 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.2■□□□□ 0.18
GSK3AP49840 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GSK3AP49840 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.2■□□□□ 0.18
GSK3AP49840 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms