Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FREM3P0C091 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.87■□□□□ 0.29
FREM3P0C091 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.87■□□□□ 0.29
FREM3P0C091 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 AL671277.2-201ENST00000458060 996 ntBASIC16.87■□□□□ 0.29
FREM3P0C091 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 FAM86EP-206ENST00000510506 987 ntBASIC16.87■□□□□ 0.29
FREM3P0C091 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.87■□□□□ 0.29
FREM3P0C091 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.87■□□□□ 0.29
FREM3P0C091 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
FREM3P0C091 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.87■□□□□ 0.29
FREM3P0C091 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.86■□□□□ 0.29
FREM3P0C091 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FREM3P0C091 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.86■□□□□ 0.29
FREM3P0C091 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
FREM3P0C091 AC005082.1-201ENST00000413042 2259 ntBASIC16.86■□□□□ 0.29
FREM3P0C091 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.86■□□□□ 0.29
FREM3P0C091 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.86■□□□□ 0.29
FREM3P0C091 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.86■□□□□ 0.29
FREM3P0C091 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.86■□□□□ 0.29
FREM3P0C091 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.86■□□□□ 0.29
FREM3P0C091 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
FREM3P0C091 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
FREM3P0C091 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FREM3P0C091 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
FREM3P0C091 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FREM3P0C091 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FREM3P0C091 SPDYE13P-201ENST00000445314 798 ntBASIC16.85■□□□□ 0.29
FREM3P0C091 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.85■□□□□ 0.29
FREM3P0C091 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.85■□□□□ 0.29
FREM3P0C091 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
FREM3P0C091 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FREM3P0C091 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.85■□□□□ 0.29
FREM3P0C091 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.85■□□□□ 0.29
FREM3P0C091 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 RASA4DP-201ENST00000460726 1199 ntBASIC16.85■□□□□ 0.29
FREM3P0C091 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.85■□□□□ 0.29
FREM3P0C091 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
FREM3P0C091 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.85■□□□□ 0.29
FREM3P0C091 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FREM3P0C091 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.85■□□□□ 0.29
FREM3P0C091 RCC2P3-201ENST00000418112 1537 ntBASIC16.85■□□□□ 0.29
FREM3P0C091 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FREM3P0C091 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.84■□□□□ 0.29
FREM3P0C091 PCED1CP-201ENST00000419887 785 ntBASIC16.84■□□□□ 0.29
FREM3P0C091 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms