Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CAPN1P07384 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN1P07384 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 TSPY14P-201ENST00000303979 915 ntBASIC18.3■□□□□ 0.52
CAPN1P07384 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 TERF1P1-201ENST00000311003 1181 ntBASIC18.3■□□□□ 0.52
CAPN1P07384 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
CAPN1P07384 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CAPN1P07384 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 SLC25A3P1-201ENST00000443844 931 ntBASIC18.3■□□□□ 0.52
CAPN1P07384 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN1P07384 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN1P07384 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN1P07384 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CAPN1P07384 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN1P07384 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN1P07384 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN1P07384 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN1P07384 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN1P07384 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CAPN1P07384 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.29■□□□□ 0.52
CAPN1P07384 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CAPN1P07384 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN1P07384 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN1P07384 CRYGFP-201ENST00000418459 633 ntBASIC18.29■□□□□ 0.52
CAPN1P07384 AC004951.3-201ENST00000418645 1148 ntBASIC18.29■□□□□ 0.52
CAPN1P07384 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN1P07384 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.29■□□□□ 0.52
CAPN1P07384 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CAPN1P07384 AC011298.2-201ENST00000617989 482 ntBASIC18.29■□□□□ 0.52
CAPN1P07384 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.29■□□□□ 0.52
CAPN1P07384 LETM1P2-201ENST00000597330 2178 ntBASIC18.29■□□□□ 0.52
CAPN1P07384 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN1P07384 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CAPN1P07384 KRT8P11-201ENST00000409686 1436 ntBASIC18.29■□□□□ 0.52
CAPN1P07384 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.29■□□□□ 0.52
CAPN1P07384 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN1P07384 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN1P07384 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN1P07384 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CAPN1P07384 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN1P07384 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
CAPN1P07384 KRT18P57-201ENST00000443599 1254 ntBASIC18.28■□□□□ 0.52
CAPN1P07384 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.28■□□□□ 0.52
CAPN1P07384 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.28■□□□□ 0.52
CAPN1P07384 EGLN1P1-201ENST00000531623 762 ntBASIC18.28■□□□□ 0.52
CAPN1P07384 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN1P07384 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CAPN1P07384 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CAPN1P07384 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN1P07384 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CAPN1P07384 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN1P07384 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN1P07384 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CAPN1P07384 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 AC135050.7-201ENST00000624508 2218 ntBASIC18.27■□□□□ 0.52
CAPN1P07384 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.27■□□□□ 0.52
CAPN1P07384 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CAPN1P07384 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms