Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV3P03979 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV3P03979 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV3P03979 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.64□□□□□ -0.07
TRGV3P03979 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV3P03979 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV3P03979 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.64□□□□□ -0.07
TRGV3P03979 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
TRGV3P03979 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV3P03979 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV3P03979 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 HMGA1P5-201ENST00000412453 271 ntBASIC14.63□□□□□ -0.07
TRGV3P03979 LIN28AP1-201ENST00000429574 405 ntBASIC14.63□□□□□ -0.07
TRGV3P03979 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRGV3P03979 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
TRGV3P03979 AL512604.3-201ENST00000569583 964 ntBASIC14.63□□□□□ -0.07
TRGV3P03979 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 AC068587.9-201ENST00000641814 219 ntBASIC14.63□□□□□ -0.07
TRGV3P03979 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRGV3P03979 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRGV3P03979 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV3P03979 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRGV3P03979 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRGV3P03979 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV3P03979 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRGV3P03979 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV3P03979 AL109659.2-201ENST00000606809 1674 ntBASIC14.62□□□□□ -0.07
TRGV3P03979 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV3P03979 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.62□□□□□ -0.07
TRGV3P03979 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV3P03979 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV3P03979 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRGV3P03979 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
TRGV3P03979 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRGV3P03979 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV3P03979 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRGV3P03979 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV3P03979 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.61□□□□□ -0.07
TRGV3P03979 AC008556.1-201ENST00000610908 2040 ntBASIC14.61□□□□□ -0.07
TRGV3P03979 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV3P03979 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV3P03979 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.61□□□□□ -0.07
TRGV3P03979 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRGV3P03979 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRGV3P03979 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV3P03979 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms