Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-CO1P00395 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MT-CO1P00395 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
MT-CO1P00395 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-CO1P00395 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MT-CO1P00395 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
MT-CO1P00395 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.03■□□□□ 0.64
MT-CO1P00395 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
MT-CO1P00395 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.03■□□□□ 0.64
MT-CO1P00395 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
MT-CO1P00395 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.03■□□□□ 0.64
MT-CO1P00395 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.03■□□□□ 0.64
MT-CO1P00395 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.03■□□□□ 0.64
MT-CO1P00395 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.03■□□□□ 0.64
MT-CO1P00395 AL359075.1-203ENST00000462729 1002 ntBASIC19.03■□□□□ 0.64
MT-CO1P00395 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.03■□□□□ 0.64
MT-CO1P00395 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
MT-CO1P00395 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
MT-CO1P00395 AC024243.1-201ENST00000609234 778 ntBASIC19.03■□□□□ 0.64
MT-CO1P00395 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.03■□□□□ 0.64
MT-CO1P00395 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.03■□□□□ 0.64
MT-CO1P00395 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
MT-CO1P00395 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
MT-CO1P00395 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MT-CO1P00395 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-CO1P00395 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.03■□□□□ 0.64
MT-CO1P00395 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-CO1P00395 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MT-CO1P00395 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-CO1P00395 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-CO1P00395 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
MT-CO1P00395 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-CO1P00395 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MT-CO1P00395 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.02■□□□□ 0.64
MT-CO1P00395 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-CO1P00395 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-CO1P00395 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-CO1P00395 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
MT-CO1P00395 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-CO1P00395 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-CO1P00395 MIR564-202ENST00000385049 94 ntBASIC19.02■□□□□ 0.64
MT-CO1P00395 AP000523.1-201ENST00000398242 1049 ntBASIC19.02■□□□□ 0.64
MT-CO1P00395 AC092647.4-201ENST00000457211 535 ntBASIC19.02■□□□□ 0.64
MT-CO1P00395 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.02■□□□□ 0.64
MT-CO1P00395 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MT-CO1P00395 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.02■□□□□ 0.64
MT-CO1P00395 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.02■□□□□ 0.64
MT-CO1P00395 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-CO1P00395 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
MT-CO1P00395 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-CO1P00395 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-CO1P00395 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-CO1P00395 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MT-CO1P00395 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
MT-CO1P00395 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
MT-CO1P00395 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.02■□□□□ 0.63
MT-CO1P00395 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
MT-CO1P00395 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.02■□□□□ 0.63
MT-CO1P00395 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-CO1P00395 HEIH-201ENST00000623091 1652 ntBASIC19.01■□□□□ 0.63
MT-CO1P00395 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.01■□□□□ 0.63
MT-CO1P00395 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-CO1P00395 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MT-CO1P00395 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.01■□□□□ 0.63
MT-CO1P00395 MYC-208ENST00000641036 567 ntBASIC19.01■□□□□ 0.63
MT-CO1P00395 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
MT-CO1P00395 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
MT-CO1P00395 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
MT-CO1P00395 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.01■□□□□ 0.63
MT-CO1P00395 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-CO1P00395 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
MT-CO1P00395 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19■□□□□ 0.63
MT-CO1P00395 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MT-CO1P00395 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19■□□□□ 0.63
MT-CO1P00395 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms