Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PLOD3O60568 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 AC005332.8-201ENST00000622750 2735 ntBASIC17.53■□□□□ 0.4
PLOD3O60568 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.53■□□□□ 0.4
PLOD3O60568 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.52■□□□□ 0.4
PLOD3O60568 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.52■□□□□ 0.4
PLOD3O60568 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.4
PLOD3O60568 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.52■□□□□ 0.4
PLOD3O60568 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 MIR1238-201ENST00000408483 83 ntBASIC17.52■□□□□ 0.4
PLOD3O60568 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.52■□□□□ 0.4
PLOD3O60568 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.52■□□□□ 0.4
PLOD3O60568 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.52■□□□□ 0.4
PLOD3O60568 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.52■□□□□ 0.4
PLOD3O60568 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PLOD3O60568 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PLOD3O60568 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
PLOD3O60568 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.52■□□□□ 0.39
PLOD3O60568 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PLOD3O60568 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.52■□□□□ 0.39
PLOD3O60568 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
PLOD3O60568 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PLOD3O60568 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PLOD3O60568 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.51■□□□□ 0.39
PLOD3O60568 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 HTR7P1-202ENST00000624664 4411 ntBASIC17.51■□□□□ 0.39
PLOD3O60568 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.51■□□□□ 0.39
PLOD3O60568 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 AL390955.1-201ENST00000428694 934 ntBASIC17.51■□□□□ 0.39
PLOD3O60568 TSPY17P-201ENST00000450329 467 ntBASIC17.51■□□□□ 0.39
PLOD3O60568 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.51■□□□□ 0.39
PLOD3O60568 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.51■□□□□ 0.39
PLOD3O60568 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.51■□□□□ 0.39
PLOD3O60568 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.51■□□□□ 0.39
PLOD3O60568 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.51■□□□□ 0.39
PLOD3O60568 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.51■□□□□ 0.39
PLOD3O60568 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PLOD3O60568 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.51■□□□□ 0.39
PLOD3O60568 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.5■□□□□ 0.39
PLOD3O60568 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PLOD3O60568 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PLOD3O60568 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.5■□□□□ 0.39
PLOD3O60568 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.5■□□□□ 0.39
PLOD3O60568 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.5■□□□□ 0.39
PLOD3O60568 AL023284.2-201ENST00000405850 579 ntBASIC17.5■□□□□ 0.39
PLOD3O60568 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.5■□□□□ 0.39
PLOD3O60568 TSPY15P-201ENST00000457163 923 ntBASIC17.5■□□□□ 0.39
PLOD3O60568 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PLOD3O60568 C2orf69P3-201ENST00000565542 1120 ntBASIC17.5■□□□□ 0.39
PLOD3O60568 AL353719.1-201ENST00000566847 864 ntBASIC17.5■□□□□ 0.39
PLOD3O60568 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.5■□□□□ 0.39
PLOD3O60568 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PLOD3O60568 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PLOD3O60568 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PLOD3O60568 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PLOD3O60568 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PLOD3O60568 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PLOD3O60568 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PLOD3O60568 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PLOD3O60568 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PLOD3O60568 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms