Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.3□□□□□ -0.28
PAX4O43316 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PAX4O43316 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
PAX4O43316 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
PAX4O43316 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.29□□□□□ -0.28
PAX4O43316 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.29□□□□□ -0.28
PAX4O43316 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.29□□□□□ -0.28
PAX4O43316 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 AC096733.2-201ENST00000609937 1394 ntBASIC13.29□□□□□ -0.28
PAX4O43316 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PAX4O43316 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.29□□□□□ -0.28
PAX4O43316 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.28□□□□□ -0.28
PAX4O43316 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PAX4O43316 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.28□□□□□ -0.28
PAX4O43316 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.28□□□□□ -0.28
PAX4O43316 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PAX4O43316 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 MIR1238-201ENST00000408483 83 ntBASIC13.28□□□□□ -0.28
PAX4O43316 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.28□□□□□ -0.28
PAX4O43316 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.28□□□□□ -0.28
PAX4O43316 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.28□□□□□ -0.28
PAX4O43316 AL355075.4-201ENST00000554988 638 ntBASIC13.28□□□□□ -0.28
PAX4O43316 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.28□□□□□ -0.28
PAX4O43316 AP000525.1-201ENST00000608286 694 ntBASIC13.28□□□□□ -0.28
PAX4O43316 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.28□□□□□ -0.28
PAX4O43316 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PAX4O43316 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PAX4O43316 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PAX4O43316 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PAX4O43316 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms