Protein–RNA interactions for Protein: O15258

RER1, Protein RER1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RER1O15258 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RER1O15258 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.34■□□□□ 0.21
RER1O15258 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.34■□□□□ 0.21
RER1O15258 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RER1O15258 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RER1O15258 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RER1O15258 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.34■□□□□ 0.21
RER1O15258 AL390955.1-201ENST00000428694 934 ntBASIC16.34■□□□□ 0.21
RER1O15258 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.34■□□□□ 0.21
RER1O15258 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RER1O15258 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.34■□□□□ 0.21
RER1O15258 MYC-208ENST00000641036 567 ntBASIC16.34■□□□□ 0.21
RER1O15258 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.34■□□□□ 0.21
RER1O15258 BICD1-207ENST00000551848 1962 ntBASIC16.34■□□□□ 0.21
RER1O15258 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 KRT8P45-201ENST00000414328 1447 ntBASIC16.34■□□□□ 0.21
RER1O15258 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RER1O15258 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RER1O15258 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RER1O15258 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RER1O15258 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RER1O15258 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RER1O15258 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
RER1O15258 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RER1O15258 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RER1O15258 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RER1O15258 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.33■□□□□ 0.2
RER1O15258 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.33■□□□□ 0.2
RER1O15258 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.33■□□□□ 0.2
RER1O15258 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.33■□□□□ 0.2
RER1O15258 AL355075.4-201ENST00000554988 638 ntBASIC16.33■□□□□ 0.2
RER1O15258 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.33■□□□□ 0.2
RER1O15258 KRT17P2-201ENST00000300992 1314 ntBASIC16.33■□□□□ 0.2
RER1O15258 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.33■□□□□ 0.2
RER1O15258 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.33■□□□□ 0.2
RER1O15258 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RER1O15258 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RER1O15258 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RER1O15258 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.32■□□□□ 0.2
RER1O15258 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RER1O15258 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 MIR1238-201ENST00000408483 83 ntBASIC16.32■□□□□ 0.2
RER1O15258 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RER1O15258 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.32■□□□□ 0.2
RER1O15258 FITM1-202ENST00000559294 800 ntBASIC16.32■□□□□ 0.2
RER1O15258 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 MIR4674-201ENST00000582457 87 ntBASIC16.32■□□□□ 0.2
RER1O15258 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 AL390961.4-201ENST00000623958 2535 ntBASIC16.32■□□□□ 0.2
RER1O15258 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RER1O15258 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RER1O15258 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RER1O15258 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RER1O15258 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.31■□□□□ 0.2
RER1O15258 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RER1O15258 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RER1O15258 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.31■□□□□ 0.2
RER1O15258 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RER1O15258 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RER1O15258 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RER1O15258 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.31■□□□□ 0.2
RER1O15258 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms