Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.08■□□□□ 0.8
CEP290O15078 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CEP290O15078 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.07■□□□□ 0.8
CEP290O15078 AC018845.2-201ENST00000568326 409 ntBASIC20.07■□□□□ 0.8
CEP290O15078 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.07■□□□□ 0.8
CEP290O15078 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.07■□□□□ 0.8
CEP290O15078 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.07■□□□□ 0.8
CEP290O15078 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CEP290O15078 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CEP290O15078 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.06■□□□□ 0.8
CEP290O15078 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.06■□□□□ 0.8
CEP290O15078 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.06■□□□□ 0.8
CEP290O15078 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CEP290O15078 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CEP290O15078 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CEP290O15078 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.06■□□□□ 0.8
CEP290O15078 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.06■□□□□ 0.8
CEP290O15078 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.06■□□□□ 0.8
CEP290O15078 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.06■□□□□ 0.8
CEP290O15078 MIR3180-4-201ENST00000582223 153 ntBASIC20.06■□□□□ 0.8
CEP290O15078 AC107918.4-202ENST00000641623 219 ntBASIC20.06■□□□□ 0.8
CEP290O15078 EP400NL-214ENST00000641289 2402 ntBASIC20.06■□□□□ 0.8
CEP290O15078 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CEP290O15078 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.06■□□□□ 0.8
CEP290O15078 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CEP290O15078 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CEP290O15078 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CEP290O15078 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CEP290O15078 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CEP290O15078 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.06■□□□□ 0.8
CEP290O15078 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CEP290O15078 INTS4P1-201ENST00000438455 1935 ntBASIC20.06■□□□□ 0.8
CEP290O15078 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CEP290O15078 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.05■□□□□ 0.8
CEP290O15078 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.05■□□□□ 0.8
CEP290O15078 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.05■□□□□ 0.8
CEP290O15078 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.05■□□□□ 0.8
CEP290O15078 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.05■□□□□ 0.8
CEP290O15078 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.05■□□□□ 0.8
CEP290O15078 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.05■□□□□ 0.8
CEP290O15078 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.05■□□□□ 0.8
CEP290O15078 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 AL008721.1-201ENST00000609964 604 ntBASIC20.05■□□□□ 0.8
CEP290O15078 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CEP290O15078 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CEP290O15078 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CEP290O15078 ELL2P1-201ENST00000413990 1906 ntBASIC20.05■□□□□ 0.8
CEP290O15078 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.05■□□□□ 0.8
CEP290O15078 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CEP290O15078 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CEP290O15078 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.04■□□□□ 0.8
CEP290O15078 MKNK2P1-201ENST00000437526 628 ntBASIC20.04■□□□□ 0.8
CEP290O15078 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CEP290O15078 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
CEP290O15078 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.04■□□□□ 0.8
CEP290O15078 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CEP290O15078 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.04■□□□□ 0.8
CEP290O15078 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.04■□□□□ 0.8
CEP290O15078 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.04■□□□□ 0.8
CEP290O15078 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.04■□□□□ 0.8
CEP290O15078 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEP290O15078 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.04■□□□□ 0.8
CEP290O15078 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.04■□□□□ 0.8
CEP290O15078 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms