Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC073508.3-201ENST00000619697 1419 ntBASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AL390961.4-201ENST00000623958 2535 ntBASIC14.96□□□□□ -0.02
TCRBV4S1A1TA0A5B7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.96□□□□□ -0.02
TCRBV4S1A1TA0A5B7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 INGX-201ENST00000359239 846 ntBASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TSPY17P-201ENST00000450329 467 ntBASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 BX664615.1-201ENST00000443558 458 ntBASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DUX4L26-201ENST00000489078 1255 ntBASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FAM87A-204ENST00000613235 858 ntBASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms