Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 AL355075.4-201ENST00000554988 638 ntBASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 NOC2LP1-202ENST00000452600 2235 ntBASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB3Q9Y5G1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 AC004951.3-201ENST00000418645 1148 ntBASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 CR392000.1-201ENST00000624770 1228 ntBASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB3Q9Y5G1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 FAM197Y1-201ENST00000421178 764 ntBASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 AC097493.4-201ENST00000641197 219 ntBASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB3Q9Y5G1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 AL133373.2-201ENST00000623187 2828 ntBASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 AC087499.1-201ENST00000418141 1075 ntBASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms