Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 MIR564-202ENST00000385049 94 ntBASIC18.68■□□□□ 0.58
PKP3Q9Y446 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 FAM87A-204ENST00000613235 858 ntBASIC18.68■□□□□ 0.58
PKP3Q9Y446 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 MYC-208ENST00000641036 567 ntBASIC18.68■□□□□ 0.58
PKP3Q9Y446 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PKP3Q9Y446 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP3Q9Y446 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 HTR7P1-202ENST00000624664 4411 ntBASIC18.66■□□□□ 0.58
PKP3Q9Y446 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 WWOX-216ENST00000569818 525 ntBASIC18.66■□□□□ 0.58
PKP3Q9Y446 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 CR769767.2-201ENST00000622735 460 ntBASIC18.66■□□□□ 0.58
PKP3Q9Y446 AC034236.2-201ENST00000606662 1610 ntBASIC18.66■□□□□ 0.58
PKP3Q9Y446 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.66■□□□□ 0.58
PKP3Q9Y446 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP3Q9Y446 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
PKP3Q9Y446 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 AL138781.2-201ENST00000617896 1843 ntBASIC18.65■□□□□ 0.58
PKP3Q9Y446 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.65■□□□□ 0.58
PKP3Q9Y446 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PKP3Q9Y446 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PKP3Q9Y446 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PKP3Q9Y446 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms