Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 AC106886.4-201ENST00000623557 2502 ntBASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 YBX1P1-201ENST00000445822 960 ntBASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 AL023806.1-201ENST00000603994 1649 ntBASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM4Q9UKN5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 KRT87P-202ENST00000534226 1464 ntBASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PRDM4Q9UKN5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 AC079140.4-201ENST00000507448 529 ntBASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM4Q9UKN5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms