Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 AP006294.2-201ENST00000641667 209 ntBASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VTI1BQ9UEU0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 HLA-A-209ENST00000638375 975 ntBASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 AC068587.9-201ENST00000641814 219 ntBASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 AC067852.2-201ENST00000590513 2313 ntBASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VTI1BQ9UEU0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 RARRES2P10-201ENST00000564312 460 ntBASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms