Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL390719.2-201ENST00000606993 987 ntBASIC21.03■□□□□ 0.96
COL20A1Q9P218 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 AL163051.1-201ENST00000569214 1512 ntBASIC21.03■□□□□ 0.96
COL20A1Q9P218 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL20A1Q9P218 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.03■□□□□ 0.96
COL20A1Q9P218 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL20A1Q9P218 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL20A1Q9P218 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL20A1Q9P218 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL20A1Q9P218 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL20A1Q9P218 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 AC092329.2-201ENST00000598402 547 ntBASIC21.02■□□□□ 0.96
COL20A1Q9P218 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL20A1Q9P218 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL20A1Q9P218 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.02■□□□□ 0.96
COL20A1Q9P218 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL20A1Q9P218 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 CHCHD2P8-201ENST00000429873 447 ntBASIC21.01■□□□□ 0.95
COL20A1Q9P218 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 AP003733.1-201ENST00000491725 852 ntBASIC21.01■□□□□ 0.95
COL20A1Q9P218 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.01■□□□□ 0.95
COL20A1Q9P218 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL20A1Q9P218 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL20A1Q9P218 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL20A1Q9P218 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL20A1Q9P218 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL20A1Q9P218 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL20A1Q9P218 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL20A1Q9P218 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COL20A1Q9P218 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21■□□□□ 0.95
COL20A1Q9P218 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21■□□□□ 0.95
COL20A1Q9P218 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21■□□□□ 0.95
COL20A1Q9P218 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21■□□□□ 0.95
COL20A1Q9P218 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21■□□□□ 0.95
COL20A1Q9P218 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21■□□□□ 0.95
COL20A1Q9P218 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21■□□□□ 0.95
COL20A1Q9P218 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21■□□□□ 0.95
COL20A1Q9P218 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL20A1Q9P218 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL20A1Q9P218 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL20A1Q9P218 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
COL20A1Q9P218 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21■□□□□ 0.95
COL20A1Q9P218 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL20A1Q9P218 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL20A1Q9P218 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL20A1Q9P218 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
COL20A1Q9P218 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.98■□□□□ 0.95
COL20A1Q9P218 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms