Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42SE1Q9NRR8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 LINC00602-201ENST00000629776 2065 ntBASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms