Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 AC009053.2-201ENST00000563701 2365 ntBASIC18.48■□□□□ 0.55
SSU72Q9NP77 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSU72Q9NP77 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SSU72Q9NP77 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSU72Q9NP77 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSU72Q9NP77 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSU72Q9NP77 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSU72Q9NP77 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 GUSBP6-202ENST00000438529 1198 ntBASIC18.47■□□□□ 0.55
SSU72Q9NP77 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSU72Q9NP77 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.47■□□□□ 0.55
SSU72Q9NP77 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSU72Q9NP77 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSU72Q9NP77 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 AL096828.2-201ENST00000567259 1965 ntBASIC18.46■□□□□ 0.55
SSU72Q9NP77 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 RCC2P3-201ENST00000418112 1537 ntBASIC18.46■□□□□ 0.55
SSU72Q9NP77 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 SLC29A4P1-201ENST00000398760 971 ntBASIC18.46■□□□□ 0.55
SSU72Q9NP77 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.46■□□□□ 0.55
SSU72Q9NP77 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 AC006116.8-202ENST00000587620 1550 ntBASIC18.46■□□□□ 0.55
SSU72Q9NP77 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SSU72Q9NP77 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSU72Q9NP77 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
SSU72Q9NP77 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
SSU72Q9NP77 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSU72Q9NP77 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SSU72Q9NP77 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSU72Q9NP77 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.45■□□□□ 0.54
SSU72Q9NP77 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSU72Q9NP77 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSU72Q9NP77 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSU72Q9NP77 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSU72Q9NP77 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SSU72Q9NP77 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SSU72Q9NP77 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.45■□□□□ 0.54
SSU72Q9NP77 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms