Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NEUROD4Q9HD90 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 AL390961.4-201ENST00000623958 2535 ntBASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 AC116562.2-201ENST00000507042 360 ntBASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEUROD4Q9HD90 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.58■□□□□ 0.41
NEUROD4Q9HD90 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 RPS2P55-201ENST00000397318 883 ntBASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 AC107956.1-201ENST00000494359 873 ntBASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.58■□□□□ 0.4
NEUROD4Q9HD90 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 AC233702.5-201ENST00000584107 538 ntBASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 AL499627.1-201ENST00000569373 2188 ntBASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.57■□□□□ 0.4
NEUROD4Q9HD90 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 AL354751.1-201ENST00000412768 1863 ntBASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEUROD4Q9HD90 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms