Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
POLR1BQ9H9Y6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 FZD10-202ENST00000539839 3282 ntBASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR1BQ9H9Y6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 AP000523.1-201ENST00000398242 1049 ntBASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR1BQ9H9Y6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR1BQ9H9Y6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR1BQ9H9Y6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
POLR1BQ9H9Y6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLR1BQ9H9Y6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
POLR1BQ9H9Y6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
POLR1BQ9H9Y6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
POLR1BQ9H9Y6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 VENTXP5-201ENST00000523979 775 ntBASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 AP003041.3-201ENST00000527151 707 ntBASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 CLEC4GP1-201ENST00000596555 870 ntBASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR1BQ9H9Y6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 AL136038.3-201ENST00000561909 1096 ntBASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms