Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.74■□□□□ 0.43
VCX3BQ9H321 AC099791.1-201ENST00000416440 715 ntBASIC17.74■□□□□ 0.43
VCX3BQ9H321 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 MFSD11-216ENST00000590393 1141 ntBASIC17.74■□□□□ 0.43
VCX3BQ9H321 AC104187.1-201ENST00000607510 612 ntBASIC17.74■□□□□ 0.43
VCX3BQ9H321 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3BQ9H321 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
VCX3BQ9H321 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 AL354811.1-201ENST00000610286 706 ntBASIC17.73■□□□□ 0.43
VCX3BQ9H321 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.73■□□□□ 0.43
VCX3BQ9H321 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3BQ9H321 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 AL118508.1-201ENST00000613502 2345 ntBASIC17.72■□□□□ 0.43
VCX3BQ9H321 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.72■□□□□ 0.43
VCX3BQ9H321 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VCX3BQ9H321 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 AC027682.1-201ENST00000562846 899 ntBASIC17.72■□□□□ 0.43
VCX3BQ9H321 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
VCX3BQ9H321 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VCX3BQ9H321 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.72■□□□□ 0.43
VCX3BQ9H321 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VCX3BQ9H321 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3BQ9H321 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.71■□□□□ 0.43
VCX3BQ9H321 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms