Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CGREF1Q99674 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.71■□□□□ 0.42
CGREF1Q99674 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.71■□□□□ 0.42
CGREF1Q99674 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CGREF1Q99674 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.7■□□□□ 0.42
CGREF1Q99674 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.7■□□□□ 0.42
CGREF1Q99674 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.7■□□□□ 0.42
CGREF1Q99674 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CGREF1Q99674 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CGREF1Q99674 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGREF1Q99674 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.69■□□□□ 0.42
CGREF1Q99674 AC093677.2-201ENST00000600169 1863 ntBASIC17.69■□□□□ 0.42
CGREF1Q99674 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CGREF1Q99674 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.69■□□□□ 0.42
CGREF1Q99674 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.69■□□□□ 0.42
CGREF1Q99674 PRORSD1P-202ENST00000563365 2154 ntBASIC17.69■□□□□ 0.42
CGREF1Q99674 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGREF1Q99674 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CGREF1Q99674 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.68■□□□□ 0.42
CGREF1Q99674 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.68■□□□□ 0.42
CGREF1Q99674 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.68■□□□□ 0.42
CGREF1Q99674 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.68■□□□□ 0.42
CGREF1Q99674 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CGREF1Q99674 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGREF1Q99674 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms