Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX18Q96RF0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SNX18Q96RF0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX18Q96RF0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.96■□□□□ 0.3
SNX18Q96RF0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX18Q96RF0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX18Q96RF0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX18Q96RF0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 MIR718-201ENST00000390190 70 ntBASIC16.95■□□□□ 0.3
SNX18Q96RF0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.95■□□□□ 0.3
SNX18Q96RF0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX18Q96RF0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 AL445675.2-201ENST00000620291 557 ntBASIC16.94■□□□□ 0.3
SNX18Q96RF0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 SIRPAP1-201ENST00000448467 1770 ntBASIC16.94■□□□□ 0.3
SNX18Q96RF0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX18Q96RF0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SNX18Q96RF0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.93■□□□□ 0.3
SNX18Q96RF0 KRASP1-201ENST00000407852 552 ntBASIC16.93■□□□□ 0.3
SNX18Q96RF0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 Z85996.1-201ENST00000494644 937 ntBASIC16.93■□□□□ 0.3
SNX18Q96RF0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNX18Q96RF0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.93■□□□□ 0.3
SNX18Q96RF0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms