Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 AC026185.1-201ENST00000445748 174 ntBASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IL1Q8TBN0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 AF201337.1-201ENST00000520239 748 ntBASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB3IL1Q8TBN0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 AC105036.2-201ENST00000569468 176 ntBASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 RCC2P6-201ENST00000526625 1557 ntBASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IL1Q8TBN0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms