Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 UBE2SP1-201ENST00000450587 669 ntBASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 KRT18P16-201ENST00000510337 1294 ntBASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 TUBB8P6-201ENST00000436895 1288 ntBASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRLF3Q8IUI8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRLF3Q8IUI8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 TSPY21P-201ENST00000433481 731 ntBASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 MTDHP1-201ENST00000605323 784 ntBASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRLF3Q8IUI8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms