Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC25Q86WR0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC25Q86WR0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 HLA-A-209ENST00000638375 975 ntBASIC19.24■□□□□ 0.67
CCDC25Q86WR0 AC008764.6-201ENST00000595909 2069 ntBASIC19.24■□□□□ 0.67
CCDC25Q86WR0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC25Q86WR0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 RCC2P6-201ENST00000526625 1557 ntBASIC19.23■□□□□ 0.67
CCDC25Q86WR0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 TSPY6P-201ENST00000448518 926 ntBASIC19.23■□□□□ 0.67
CCDC25Q86WR0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 AC098934.4-201ENST00000564127 592 ntBASIC19.23■□□□□ 0.67
CCDC25Q86WR0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC25Q86WR0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.22■□□□□ 0.67
CCDC25Q86WR0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 AC135776.1-201ENST00000319817 2481 ntBASIC19.22■□□□□ 0.67
CCDC25Q86WR0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 AC083880.1-201ENST00000608266 535 ntBASIC19.22■□□□□ 0.67
CCDC25Q86WR0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC25Q86WR0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.21■□□□□ 0.67
CCDC25Q86WR0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC25Q86WR0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.66
CCDC25Q86WR0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.2■□□□□ 0.66
CCDC25Q86WR0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms