Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SGO1Q5FBB7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SGO1Q5FBB7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.12■□□□□ 0.49
SGO1Q5FBB7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SGO1Q5FBB7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 B3GAT3P1-201ENST00000471720 806 ntBASIC18.11■□□□□ 0.49
SGO1Q5FBB7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 AC026271.3-201ENST00000571884 352 ntBASIC18.11■□□□□ 0.49
SGO1Q5FBB7 CD177P1-201ENST00000606252 935 ntBASIC18.11■□□□□ 0.49
SGO1Q5FBB7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 MTMR9LP-203ENST00000426597 1545 ntBASIC18.11■□□□□ 0.49
SGO1Q5FBB7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SGO1Q5FBB7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 KRT8P32-201ENST00000512863 1461 ntBASIC18.1■□□□□ 0.49
SGO1Q5FBB7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 KRT8P3-201ENST00000519669 1449 ntBASIC18.1■□□□□ 0.49
SGO1Q5FBB7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 AC098590.1-201ENST00000468126 897 ntBASIC18.1■□□□□ 0.49
SGO1Q5FBB7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 CKBP1-201ENST00000565489 1086 ntBASIC18.1■□□□□ 0.49
SGO1Q5FBB7 AC068587.9-201ENST00000641814 219 ntBASIC18.1■□□□□ 0.49
SGO1Q5FBB7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 AC135050.7-201ENST00000624508 2218 ntBASIC18.1■□□□□ 0.49
SGO1Q5FBB7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SGO1Q5FBB7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms