Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 AL023875.1-201ENST00000640777 796 ntBASIC16.5■□□□□ 0.23
ODF4Q2M2E3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ODF4Q2M2E3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 AC068880.1-201ENST00000507289 2297 ntBASIC16.49■□□□□ 0.23
ODF4Q2M2E3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 KRT17P3-201ENST00000420566 1262 ntBASIC16.49■□□□□ 0.23
ODF4Q2M2E3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 AP003097.1-201ENST00000530657 1135 ntBASIC16.49■□□□□ 0.23
ODF4Q2M2E3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 AC069544.1-201ENST00000609399 999 ntBASIC16.49■□□□□ 0.23
ODF4Q2M2E3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 KRT8P41-201ENST00000533985 1514 ntBASIC16.49■□□□□ 0.23
ODF4Q2M2E3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ODF4Q2M2E3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 HLA-L-209ENST00000420110 1011 ntBASIC16.48■□□□□ 0.23
ODF4Q2M2E3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 MTDHP1-201ENST00000605323 784 ntBASIC16.48■□□□□ 0.23
ODF4Q2M2E3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ODF4Q2M2E3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms