Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAB38P57729 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB38P57729 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 FAM210CP-201ENST00000445714 574 ntBASIC17.49■□□□□ 0.39
RAB38P57729 SEC1P-202ENST00000473944 940 ntBASIC17.49■□□□□ 0.39
RAB38P57729 YBX1P2-201ENST00000489612 999 ntBASIC17.49■□□□□ 0.39
RAB38P57729 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB38P57729 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB38P57729 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB38P57729 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB38P57729 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAB38P57729 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB38P57729 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB38P57729 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
RAB38P57729 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB38P57729 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB38P57729 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB38P57729 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB38P57729 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB38P57729 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB38P57729 AK4P3-201ENST00000418260 669 ntBASIC17.48■□□□□ 0.39
RAB38P57729 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB38P57729 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB38P57729 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.48■□□□□ 0.39
RAB38P57729 GCSHP2-201ENST00000560971 527 ntBASIC17.48■□□□□ 0.39
RAB38P57729 AL441883.1-201ENST00000566170 1045 ntBASIC17.48■□□□□ 0.39
RAB38P57729 AC011558.1-201ENST00000623459 338 ntBASIC17.48■□□□□ 0.39
RAB38P57729 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB38P57729 AC004408.2-201ENST00000623613 2777 ntBASIC17.48■□□□□ 0.39
RAB38P57729 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 MYLKP1-201ENST00000509077 1580 ntBASIC17.48■□□□□ 0.39
RAB38P57729 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB38P57729 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB38P57729 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB38P57729 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAB38P57729 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RAB38P57729 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 AL138781.2-201ENST00000617896 1843 ntBASIC17.47■□□□□ 0.39
RAB38P57729 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB38P57729 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAB38P57729 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 AC104076.2-201ENST00000448912 469 ntBASIC17.47■□□□□ 0.39
RAB38P57729 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB38P57729 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB38P57729 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
RAB38P57729 AC010240.3-201ENST00000607688 395 ntBASIC17.47■□□□□ 0.39
RAB38P57729 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB38P57729 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB38P57729 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RAB38P57729 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB38P57729 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB38P57729 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB38P57729 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB38P57729 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB38P57729 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RAB38P57729 RNF152P1-201ENST00000397754 604 ntBASIC17.46■□□□□ 0.39
RAB38P57729 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.46■□□□□ 0.39
RAB38P57729 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB38P57729 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
RAB38P57729 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB38P57729 AC009065.1-201ENST00000564055 1225 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms