Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.65■□□□□ 0.1
CD74P04233 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.65■□□□□ 0.1
CD74P04233 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.65■□□□□ 0.1
CD74P04233 AC080080.1-201ENST00000625121 2420 ntBASIC15.65■□□□□ 0.1
CD74P04233 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD74P04233 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.65■□□□□ 0.1
CD74P04233 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.65■□□□□ 0.1
CD74P04233 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.65■□□□□ 0.1
CD74P04233 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CD74P04233 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CD74P04233 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.65■□□□□ 0.1
CD74P04233 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.65■□□□□ 0.1
CD74P04233 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CD74P04233 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.65■□□□□ 0.1
CD74P04233 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.65■□□□□ 0.1
CD74P04233 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.65■□□□□ 0.1
CD74P04233 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CD74P04233 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.65■□□□□ 0.1
CD74P04233 HLA-A-209ENST00000638375 975 ntBASIC15.65■□□□□ 0.1
CD74P04233 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.65■□□□□ 0.1
CD74P04233 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.65■□□□□ 0.1
CD74P04233 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD74P04233 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.64■□□□□ 0.09
CD74P04233 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 KRT8P41-201ENST00000533985 1514 ntBASIC15.64■□□□□ 0.09
CD74P04233 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.64■□□□□ 0.09
CD74P04233 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CD74P04233 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.64■□□□□ 0.09
CD74P04233 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.64■□□□□ 0.09
CD74P04233 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.64■□□□□ 0.09
CD74P04233 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
CD74P04233 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CD74P04233 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.64■□□□□ 0.09
CD74P04233 KRT18P5-201ENST00000436075 1291 ntBASIC15.64■□□□□ 0.09
CD74P04233 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.64■□□□□ 0.09
CD74P04233 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.64■□□□□ 0.09
CD74P04233 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.64■□□□□ 0.09
CD74P04233 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.64■□□□□ 0.09
CD74P04233 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.64■□□□□ 0.09
CD74P04233 RARRES2P6-201ENST00000567333 442 ntBASIC15.64■□□□□ 0.09
CD74P04233 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.64■□□□□ 0.09
CD74P04233 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.64■□□□□ 0.09
CD74P04233 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CD74P04233 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CD74P04233 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD74P04233 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.64■□□□□ 0.09
CD74P04233 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CD74P04233 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.63■□□□□ 0.09
CD74P04233 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CD74P04233 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CD74P04233 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CD74P04233 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CD74P04233 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.63■□□□□ 0.09
CD74P04233 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.63■□□□□ 0.09
CD74P04233 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.63■□□□□ 0.09
CD74P04233 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CD74P04233 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.63■□□□□ 0.09
CD74P04233 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CD74P04233 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.63■□□□□ 0.09
CD74P04233 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms