Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TSPY20P-201ENST00000450910 630 ntBASIC18.06■□□□□ 0.48
KRT6AP02538 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT6AP02538 AP000692.2-201ENST00000608391 879 ntBASIC18.06■□□□□ 0.48
KRT6AP02538 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT6AP02538 RCC2P3-201ENST00000418112 1537 ntBASIC18.06■□□□□ 0.48
KRT6AP02538 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KRT6AP02538 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KRT6AP02538 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT6AP02538 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
KRT6AP02538 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT6AP02538 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT6AP02538 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT6AP02538 OR6D1P-202ENST00000641007 5290 ntBASIC18.06■□□□□ 0.48
KRT6AP02538 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KRT6AP02538 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
KRT6AP02538 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KRT6AP02538 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 AL357033.4-201ENST00000617703 1807 ntBASIC18.05■□□□□ 0.48
KRT6AP02538 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
KRT6AP02538 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
KRT6AP02538 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
KRT6AP02538 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KRT6AP02538 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.05■□□□□ 0.48
KRT6AP02538 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT6AP02538 CD177P1-201ENST00000606252 935 ntBASIC18.05■□□□□ 0.48
KRT6AP02538 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT6AP02538 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT6AP02538 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT6AP02538 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT6AP02538 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
KRT6AP02538 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KRT6AP02538 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.04■□□□□ 0.48
KRT6AP02538 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.04■□□□□ 0.48
KRT6AP02538 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
KRT6AP02538 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT6AP02538 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT6AP02538 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.03■□□□□ 0.48
KRT6AP02538 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KRT6AP02538 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KRT6AP02538 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT6AP02538 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.03■□□□□ 0.48
KRT6AP02538 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms