Protein–RNA interactions for Protein: O75678

RFPL2, Ret finger protein-like 2, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL2O75678 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFPL2O75678 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.46■□□□□ 0.71
RFPL2O75678 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.46■□□□□ 0.71
RFPL2O75678 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RFPL2O75678 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RFPL2O75678 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 AP002469.2-201ENST00000531724 424 ntBASIC19.46■□□□□ 0.71
RFPL2O75678 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.46■□□□□ 0.71
RFPL2O75678 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.46■□□□□ 0.71
RFPL2O75678 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RFPL2O75678 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.46■□□□□ 0.71
RFPL2O75678 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
RFPL2O75678 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
RFPL2O75678 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFPL2O75678 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RFPL2O75678 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.45■□□□□ 0.7
RFPL2O75678 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.45■□□□□ 0.7
RFPL2O75678 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.45■□□□□ 0.7
RFPL2O75678 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.45■□□□□ 0.7
RFPL2O75678 KRT16P4-201ENST00000453883 522 ntBASIC19.45■□□□□ 0.7
RFPL2O75678 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.45■□□□□ 0.7
RFPL2O75678 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.45■□□□□ 0.7
RFPL2O75678 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 AL592071.1-201ENST00000611956 408 ntBASIC19.45■□□□□ 0.7
RFPL2O75678 AC124864.1-201ENST00000623408 392 ntBASIC19.45■□□□□ 0.7
RFPL2O75678 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.45■□□□□ 0.7
RFPL2O75678 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.45■□□□□ 0.7
RFPL2O75678 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.45■□□□□ 0.7
RFPL2O75678 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFPL2O75678 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RFPL2O75678 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFPL2O75678 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.44■□□□□ 0.7
RFPL2O75678 AL158211.5-201ENST00000623583 2518 ntBASIC19.44■□□□□ 0.7
RFPL2O75678 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.44■□□□□ 0.7
RFPL2O75678 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.44■□□□□ 0.7
RFPL2O75678 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.44■□□□□ 0.7
RFPL2O75678 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RFPL2O75678 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.44■□□□□ 0.7
RFPL2O75678 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.44■□□□□ 0.7
RFPL2O75678 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.44■□□□□ 0.7
RFPL2O75678 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 MIR3180-4-201ENST00000582223 153 ntBASIC19.44■□□□□ 0.7
RFPL2O75678 SLC25A6P4-201ENST00000586535 553 ntBASIC19.44■□□□□ 0.7
RFPL2O75678 Z69720.1-201ENST00000601483 472 ntBASIC19.44■□□□□ 0.7
RFPL2O75678 AC024563.2-201ENST00000603282 481 ntBASIC19.44■□□□□ 0.7
RFPL2O75678 AL353801.3-201ENST00000609898 542 ntBASIC19.44■□□□□ 0.7
RFPL2O75678 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.44■□□□□ 0.7
RFPL2O75678 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.44■□□□□ 0.7
RFPL2O75678 FP475955.4-201ENST00000623131 1990 ntBASIC19.44■□□□□ 0.7
RFPL2O75678 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFPL2O75678 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.44■□□□□ 0.7
RFPL2O75678 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.44■□□□□ 0.7
RFPL2O75678 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL2O75678 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL2O75678 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.43■□□□□ 0.7
RFPL2O75678 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
RFPL2O75678 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL2O75678 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RFPL2O75678 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
RFPL2O75678 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL2O75678 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL2O75678 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFPL2O75678 AL022342.1-201ENST00000400363 863 ntBASIC19.43■□□□□ 0.7
RFPL2O75678 IGHV3-47-201ENST00000425060 335 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms