Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 C2orf69P3-201ENST00000565542 1120 ntBASIC17.91■□□□□ 0.46
PRAMEF4O60810 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEF4O60810 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.91■□□□□ 0.46
PRAMEF4O60810 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 EGLN1P1-201ENST00000531623 762 ntBASIC17.9■□□□□ 0.46
PRAMEF4O60810 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 AC116562.4-202ENST00000641738 218 ntBASIC17.9■□□□□ 0.46
PRAMEF4O60810 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 AC034236.2-201ENST00000606662 1610 ntBASIC17.9■□□□□ 0.46
PRAMEF4O60810 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.9■□□□□ 0.46
PRAMEF4O60810 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEF4O60810 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
PRAMEF4O60810 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PRAMEF4O60810 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.89■□□□□ 0.46
PRAMEF4O60810 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 AL390961.4-201ENST00000623958 2535 ntBASIC17.89■□□□□ 0.45
PRAMEF4O60810 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 CCR12P-201ENST00000446203 998 ntBASIC17.89■□□□□ 0.45
PRAMEF4O60810 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 BX088651.1-201ENST00000540551 451 ntBASIC17.89■□□□□ 0.45
PRAMEF4O60810 WWOX-216ENST00000569818 525 ntBASIC17.89■□□□□ 0.45
PRAMEF4O60810 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEF4O60810 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF4O60810 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PRAMEF4O60810 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF4O60810 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF4O60810 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF4O60810 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PRAMEF4O60810 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF4O60810 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
PRAMEF4O60810 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF4O60810 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms