Protein–RNA interactions for Protein: O14813

PHOX2A, Paired mesoderm homeobox protein 2A, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2AO14813 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PHOX2AO14813 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.37□□□□□ -0.11
PHOX2AO14813 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 CROCCP2-202ENST00000412962 2773 ntBASIC14.37□□□□□ -0.11
PHOX2AO14813 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PHOX2AO14813 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.37□□□□□ -0.11
PHOX2AO14813 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.37□□□□□ -0.11
PHOX2AO14813 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 IGHV3-19-201ENST00000521488 291 ntBASIC14.37□□□□□ -0.11
PHOX2AO14813 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.37□□□□□ -0.11
PHOX2AO14813 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.37□□□□□ -0.11
PHOX2AO14813 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.37□□□□□ -0.11
PHOX2AO14813 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHOX2AO14813 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 IRX1P1-201ENST00000438849 1838 ntBASIC14.36□□□□□ -0.11
PHOX2AO14813 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PHOX2AO14813 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PHOX2AO14813 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 PCDHB19P-201ENST00000570871 2371 ntBASIC14.36□□□□□ -0.11
PHOX2AO14813 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.36□□□□□ -0.11
PHOX2AO14813 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.36□□□□□ -0.11
PHOX2AO14813 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.36□□□□□ -0.11
PHOX2AO14813 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.36□□□□□ -0.11
PHOX2AO14813 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PHOX2AO14813 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 AP001094.4-201ENST00000579008 2176 ntBASIC14.36□□□□□ -0.11
PHOX2AO14813 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PHOX2AO14813 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.36□□□□□ -0.11
PHOX2AO14813 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHOX2AO14813 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.36□□□□□ -0.11
PHOX2AO14813 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
PHOX2AO14813 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.35□□□□□ -0.11
PHOX2AO14813 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.35□□□□□ -0.11
PHOX2AO14813 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.35□□□□□ -0.11
PHOX2AO14813 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.35□□□□□ -0.11
PHOX2AO14813 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PHOX2AO14813 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
PHOX2AO14813 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PHOX2AO14813 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.35□□□□□ -0.11
PHOX2AO14813 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHOX2AO14813 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms