Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 KRT8P9-201ENST00000558927 1449 ntBASIC13.62□□□□□ -0.23
NACAE9PAV3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.62□□□□□ -0.23
NACAE9PAV3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.62□□□□□ -0.23
NACAE9PAV3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.62□□□□□ -0.23
NACAE9PAV3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.62□□□□□ -0.23
NACAE9PAV3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NACAE9PAV3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.62□□□□□ -0.23
NACAE9PAV3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NACAE9PAV3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 MTMR9LP-203ENST00000426597 1545 ntBASIC13.62□□□□□ -0.23
NACAE9PAV3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.62□□□□□ -0.23
NACAE9PAV3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NACAE9PAV3 KRT17P2-201ENST00000300992 1314 ntBASIC13.62□□□□□ -0.23
NACAE9PAV3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NACAE9PAV3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NACAE9PAV3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.62□□□□□ -0.23
NACAE9PAV3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 AP001412.1-201ENST00000608405 714 ntBASIC13.62□□□□□ -0.23
NACAE9PAV3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.62□□□□□ -0.23
NACAE9PAV3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.62□□□□□ -0.23
NACAE9PAV3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NACAE9PAV3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.62□□□□□ -0.23
NACAE9PAV3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.61□□□□□ -0.23
NACAE9PAV3 AC093525.10-201ENST00000625130 1569 ntBASIC13.61□□□□□ -0.23
NACAE9PAV3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.61□□□□□ -0.23
NACAE9PAV3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.61□□□□□ -0.23
NACAE9PAV3 AL031598.1-201ENST00000561511 1773 ntBASIC13.61□□□□□ -0.23
NACAE9PAV3 Z98044.1-201ENST00000632503 1764 ntBASIC13.61□□□□□ -0.23
NACAE9PAV3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
NACAE9PAV3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.61□□□□□ -0.23
NACAE9PAV3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 AC087499.1-201ENST00000418141 1075 ntBASIC13.61□□□□□ -0.23
NACAE9PAV3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NACAE9PAV3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.61□□□□□ -0.23
NACAE9PAV3 HLA-A-209ENST00000638375 975 ntBASIC13.61□□□□□ -0.23
NACAE9PAV3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NACAE9PAV3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.61□□□□□ -0.23
NACAE9PAV3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NACAE9PAV3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.61□□□□□ -0.23
NACAE9PAV3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NACAE9PAV3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.61□□□□□ -0.23
NACAE9PAV3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NACAE9PAV3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NACAE9PAV3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.61□□□□□ -0.23
NACAE9PAV3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.6□□□□□ -0.23
NACAE9PAV3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.6□□□□□ -0.23
NACAE9PAV3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.6□□□□□ -0.23
NACAE9PAV3 CD177P1-201ENST00000606252 935 ntBASIC13.6□□□□□ -0.23
NACAE9PAV3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.6□□□□□ -0.23
NACAE9PAV3 REXO1L10P-201ENST00000615707 1290 ntBASIC13.6□□□□□ -0.23
NACAE9PAV3 REXO1L12P-201ENST00000622156 912 ntBASIC13.6□□□□□ -0.23
NACAE9PAV3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.6□□□□□ -0.23
NACAE9PAV3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.6□□□□□ -0.23
NACAE9PAV3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NACAE9PAV3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms