Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF103-CHMP3A0A140T963 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 FEM1AP3-201ENST00000403722 1741 ntBASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 ABALON-201ENST00000629058 1903 ntBASIC17.96■□□□□ 0.47
RNF103-CHMP3A0A140T963 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC239809.2-201ENST00000415381 517 ntBASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 AL160286.2-201ENST00000567150 934 ntBASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF103-CHMP3A0A140T963 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 KRASP1-201ENST00000407852 552 ntBASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 KRT18P6-201ENST00000555540 1265 ntBASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 AL023875.1-201ENST00000640777 796 ntBASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF103-CHMP3A0A140T963 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 250.5 ms