Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 AC093525.10-201ENST00000625130 1569 ntBASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 ATP5G2P1-201ENST00000433580 426 ntBASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 MTMR9LP-203ENST00000426597 1545 ntBASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 AC120498.9-201ENST00000339021 3867 ntBASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV5A0A0B4J1U4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 AL049812.1-201ENST00000432563 2267 ntBASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 KRT18P48-201ENST00000434763 852 ntBASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 TSSC2-201ENST00000450217 709 ntBASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 AC116562.4-201ENST00000641316 2276 ntBASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV5A0A0B4J1U4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 AP000593.1-201ENST00000393668 712 ntBASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 KRT8P26-201ENST00000534154 1276 ntBASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms