Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 AL603756.1-201ENST00000606511 2163 ntBASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 AP006587.3-201ENST00000525742 1516 ntBASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC01558Q9Y6Z2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 AGGF1P2-201ENST00000426656 2106 ntBASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC01558Q9Y6Z2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms