Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC1Q9Y5R8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 UBALD1-205ENST00000590891 2641 ntBASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 NTF6A-201ENST00000591175 560 ntBASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAPPC1Q9Y5R8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 SERBP1P1-201ENST00000396021 1160 ntBASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 AC068418.2-201ENST00000577309 3703 ntBASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC1Q9Y5R8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 FLJ16779-201ENST00000612722 7638 ntBASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 AL121761.2-201ENST00000598007 1648 ntBASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 AL023806.1-201ENST00000603994 1649 ntBASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms