Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
PCDHAC2Q9Y5I4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHAC2Q9Y5I4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHAC2Q9Y5I4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.16■■□□□ 1.14
PCDHAC2Q9Y5I4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 Z98044.1-201ENST00000632503 1764 ntBASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 HLA-A-201ENST00000376802 1334 ntBASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 AF238378.1-201ENST00000526806 358 ntBASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 AC004263.2-201ENST00000617183 678 ntBASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 TP73-AS1-207ENST00000624167 988 ntBASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHAC2Q9Y5I4 KRT8P50-201ENST00000562022 1438 ntBASIC22.14■■□□□ 1.14
PCDHAC2Q9Y5I4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDHAC2Q9Y5I4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDHAC2Q9Y5I4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
PCDHAC2Q9Y5I4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHAC2Q9Y5I4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHAC2Q9Y5I4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 Z69720.1-201ENST00000601483 472 ntBASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 AC023511.2-201ENST00000618803 211 ntBASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHAC2Q9Y5I4 AL353692.3-201ENST00000407031 1396 ntBASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 NUS1P2-201ENST00000417358 873 ntBASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHAC2Q9Y5I4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 MTMR9LP-203ENST00000426597 1545 ntBASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHAC2Q9Y5I4 MIR3180-4-201ENST00000582223 153 ntBASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms