Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PRDM4Q9UKN5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRDM4Q9UKN5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 AC144831.1-201ENST00000573312 2656 ntBASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 POU5F1P4-201ENST00000413175 1085 ntBASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM4Q9UKN5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 AC022188.1-201ENST00000620960 1664 ntBASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM4Q9UKN5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms