Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX1Q9NWB1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX1Q9NWB1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX1Q9NWB1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RBFOX1Q9NWB1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX1Q9NWB1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RBFOX1Q9NWB1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RBFOX1Q9NWB1 AC012317.2-201ENST00000623305 2251 ntBASIC16.47■□□□□ 0.23
RBFOX1Q9NWB1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 YBX1P10-201ENST00000444752 975 ntBASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RBFOX1Q9NWB1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
RBFOX1Q9NWB1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RBFOX1Q9NWB1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RBFOX1Q9NWB1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX1Q9NWB1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RBFOX1Q9NWB1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RBFOX1Q9NWB1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms